Archive for February 2012
The Iranian Genome Project
Yesterday, my father emailed me a link to the Iranian Genome Project that caught my eye. Ironically, Razib over at Gene Expression also highlighted this project in a recent post. Much like the intentions Harappa & Dodecad ancestry projects, of which I’ve participated in by submitting my 23andme data, the Iranian Genome Project aims to enlighten Iranian heritage and health. As an Iranian American who follows population genetics regularly, I am very keen on intersection of these two topics.
I’ll be following the project, but honestly I don’t have high hopes. I would love to be proven wrong. It seems lofty, using a lot of high yield buzzwords. My first impression was if this nothing more than a CV booster … Especially since it hasn’t been updated since last September. I guess it can’t be completely an empty shell because they have an impressive member on research team, Pardis Sabeti.
You can learn more about this project by checking out their site, watching the following video and following them on Twitter: @irangenes. If you want, you can participate in the project by filling out this survey.
Complete Denisova Genome Released
We’ve covered the mitochondrial genome of the Denisova individual 2 years ago, back in March 2010. For those not familiar with the Denisova hominin, this specimen represents an archaic human species present at least 41,000 years ago – coexisting with Neandertals and modern humans in the Altai Mountains of Siberia. The species is represented by a tooth and phalange.
A draft of the genome was released shortly afterwards in December, 2010. Today, after 30-fold coverage of the genome using Illumina GAIIx sequencing platform, the complete genome was released. It is free to download and use on Amazon Web Services… weighing in at 160gb. I can imagine a lot of interesting comparisons can be made with this dataset and am happy the researchers made it available to the public. There’s a caveat though, you can use the data but however agree that you cannot publish your findings until the researchers at Max Planck first get a stab at it.
